Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807242.1_cds_XP_016494766.1_9147
CDS Infomation

[gene=LOC107813960] [db_xref=GeneID:107813960] [protein=primary amine oxidase-like] [protein_id=XP_016494766.1] [location=complement(join(23345..23504,23639..24180,24462..24575,24657..25808))] [gbkey=CDS]
Sequence

ATGGAGTTCATAAAAGTAGTGTCCACATCCTTTACTCTTCCAATTCTTGTTATTGTCTTT
TTGTTCTTTTCCACTAGAAGCCAATGCCATCCTTTAGACCCTCTAAATCCTACTGAGATC
AACAAGATTAGAGTCATTATTCAAAAATCTCATCTTAGTTCCCTCTCCAATTTAACATTT
CACTTTGTTGATCTTGAAGAGCCTGAAAAACAGGATGTCCTTCATTGGCTGTCCTTAAAT
AAGCGCGAAAGTGTTCCTTTTCCTTATCGTCGAGCCAAGGTAGTGGTTCGTGCAAATGGT
GAGACGTTTGAAGTCGTTGTAGACTTGGCTACGCGATCTATCATATCAGAAAATGTATAT
ACTGGTCATGGTTTCCCTCCACTTACTCTCGACGAAATTGTACAATGCAGCAGGCTGACA
TTGAGGAATCCTAAATTTCAAGATTCAATATTGAAAAGGGGTTTGAATATATCAGAAGTT
AGTTGCATACCACAGCCAGTAGGATGGTTCGGGCAGCCAAGGACACGAAGAGTACTTAAC
GTTCCATGTTTTTATCGCAATGGGACTACTAATTTTTGGGGAAGGCCAATTGAAGGGATC
ACTACAATAGTAGATGTTGAATCCATAAAGATAATCAAATATATGGACAGATTCAGAGTC
CCTTTGCCTGAAGCCGAGAGTGCTGATTTTCAATCATCGAGCCAGAGATCAGTCGCTTGC
AATGACACTGGTACAAGCCGGATTATCATCAAAGGCAATGAAGTTAAATGGGATAATTGG
ATTTTTCATGTTGGATTGAACACGAGGGCGGGGACTATCGTGTCTACAGCTTCTATATTC
GATCATACAAGAAATGAATATCGACATGTGCTCTATAGAGGTCATGTATCTGAGACATTT
GTGCCTTATATGGATCCTACATTTGAATGGTACTATAGGACTTTTATGGATATTGGTGAA
TTTGGCTTTGGAAGGTCTGCTAGTAGTCTTGTCCCGTTGCTAGATTGTCCGAACAATGCA
GTGTATATGGACGGATATATGGCTGATTCAGAAGGACATGTAGTTCAAGTTCCCAACGCG
ATTTGCATGTTTGAAAGATATGTTGGCGATGCTGCTTGGAGGCATACAGAAAATGGAGTA
CCGGGAAATATAAACACTAAGGGACAGCAAGAAGTTAATTTGGTTGTTAGAATGGTTGCA
ACAGTGGGAAATTATGATTATACACTTGATTGGGAGTTCAAACAAAGTGGAACTCTCAGA
GTTGGAGTAAGCTTGAGCGGAGTTATGGAGACGAAGGCTGTGAAATATACGAACGATAAT
CAAATAACAGAGGATGTTTACGGGACCCTTGTGGCGAAAAACACTATTGCAGTTAACCAT
GATCACTTCCTTATTTACTATCTTGATCTTGATATTGATGGTACTGATAATTTATTCCTA
AAAGCCAAACTGAAAACTAGAAGAGTGAAGGACTCAAAAATTTCACCTAGGAAAAGTTAT
TGGAAAGTTGTTAAAGAAACTATGAAAACAGAAAATGAGGCTAAGATACACCTAGGACTA
GAACCAGCTGAATTGTTGATTGTAAATCCAAATAAGAAAACAAAGATTGGAAATGATGTA
TCTTATCGACTAATACCTAGTCGACCAGCTATGTCGTTGCTATCATATGATGATTATCCT
CAACTTCGAGCAGCCTATACAAAGTATCAATTGTGGGTGACGCCATACAACAAATCAGAA
AGATGGGCTGGAGGATTCTACGCTGATAGGAGTCGAGGAGATGATGGCCTTGCAATCTGG
AGTCGCAGGAATAGGCCTATTGAAAACAAGGATATTGTGCTTTGGTACACTGTTGGACTC
CATCATGTACCATGCCAAGAAGATTTTCCTGTAATGCCTTCATTTTATGATGGATTCGAG
CTCCGGCCAACAAATTTCTTTGAAAGAAATCCATTGCTGAAACAATGA

Peptide Sequence

PEP ID

XP_016494766.1
PEP Infomation

PREDICTED: primary amine oxidase-like [Nicotiana tabacum]
Sequence

MEFIKVVSTSFTLPILVIVFLFFSTRSQCHPLDPLNPTEINKIRVIIQKSHLSSLSNLTF
HFVDLEEPEKQDVLHWLSLNKRESVPFPYRRAKVVVRANGETFEVVVDLATRSIISENVY
TGHGFPPLTLDEIVQCSRLTLRNPKFQDSILKRGLNISEVSCIPQPVGWFGQPRTRRVLN
VPCFYRNGTTNFWGRPIEGITTIVDVESIKIIKYMDRFRVPLPEAESADFQSSSQRSVAC
NDTGTSRIIIKGNEVKWDNWIFHVGLNTRAGTIVSTASIFDHTRNEYRHVLYRGHVSETF
VPYMDPTFEWYYRTFMDIGEFGFGRSASSLVPLLDCPNNAVYMDGYMADSEGHVVQVPNA
ICMFERYVGDAAWRHTENGVPGNINTKGQQEVNLVVRMVATVGNYDYTLDWEFKQSGTLR
VGVSLSGVMETKAVKYTNDNQITEDVYGTLVAKNTIAVNHDHFLIYYLDLDIDGTDNLFL
KAKLKTRRVKDSKISPRKSYWKVVKETMKTENEAKIHLGLEPAELLIVNPNKKTKIGNDV
SYRLIPSRPAMSLLSYDDYPQLRAAYTKYQLWVTPYNKSERWAGGFYADRSRGDDGLAIW
SRRNRPIENKDIVLWYTVGLHHVPCQEDFPVMPSFYDGFELRPTNFFERNPLLKQ

Transcript Sequence

Gene sequence data has not been registered.